Galaxy workflow converter

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Revision as of 21:20, 9 November 2022 by Twang9 (talk | contribs) (Created page with "Workflows can be directly downloaded from Galaxy but file conversion is needed in order to transfer into BCODB successfully. Please follow the following steps to convert the file and validation: == File conversion == # Download the converter [https://github.com/FDA-ARGOS/data.argosdb/blob/main/lib/galaxy%20converter.py script] from GitHub. # On the local terminal, run the following command <code>python [converter script's name.py] -b [path to the file that needs to be co...")
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Workflows can be directly downloaded from Galaxy but file conversion is needed in order to transfer into BCODB successfully. Please follow the following steps to convert the file and validation:

File conversion

  1. Download the converter script from GitHub.
  2. On the local terminal, run the following command python [converter script's name.py] -b [path to the file that needs to be converted] -o [path to the output file]

Validation

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