Parametric-domain
Revision as of 20:07, 3 August 2022 by Twang9 (talk | contribs) (Created page with "Back to BCO domains == Parametric Domain “parametric_domain” == This optional domain represents the list of parameters customizing the computational flow which can affect the output of the calculations. These fields can be custom to each kind of analysis and are tied to a particular pipeline implementation. It is recommended that these fields be generated automatically, but that may not always be possible. Please refer to the documentation of indivi...")
Back to BCO domains
Parametric Domain “parametric_domain”
This optional domain represents the list of parameters customizing the computational flow which can affect the output of the calculations. These fields can be custom to each kind of analysis and are tied to a particular pipeline implementation. It is recommended that these fields be generated automatically, but that may not always be possible. Please refer to the documentation of individual scripts and specific BCO descriptions for details. While this domain is not required, it is recommended that it be populated and that the values be NON-DEFAULT parameters.
"parametric_domain": [
{"param": "seed", "value": "14", "step": "1"},
{"param":"minimum_match_len", "value": "66", "step": "1"},
{"param": "divergence_threshold_percent", "value": 0.30, "step": "1"},
{"param": "minimum_coverage", "value": "15", "step": "2"},
{"param": "freq_cutoff", "value": 0.10, "step": "2"}
]