Description-domain

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Description Domain “description_domain”

This section defines the fields of the description_domain part of the BCO structure.

Structured field for description of external references, the pipeline steps, and the relationship of I/O objects. Information in this domain is not used for computation. This domain is meant to capture information that is currently being provided in FDA submission in a standardized format. It is possible that some of these fields be automatically generated from the execution_domain information, and that some of them may repeat.

Condensed example:

   "description_domain": {
       "keywords": [
       ], 
       "xref": [
       ],
       "platform": ["HIVE"],
       "pipeline_steps": [
           {
               "step_number": 1, 
               "name": "HIVE-hexagon", 
               "description": "Alignment of reads to a set of references", 
               "version": "1.3", 
               "prerequisite": [
                   {
                       "name": "Hepatitis C virus genotype 1", 
                       "uri": {
                           "uri": "http://www.ncbi.nlm.nih.gov/nuccore/22129792",
                           "access_time": "2017-01-24T09:40:17-0500"
                       }
                   }
               ], 
               "input_list": [
               ],
               "output_list": [
               ]
           }
       ]
   }

Keywords “keywords"

This is a list of keywords to aid in search-ability and description of the experiment. This is required.

   "keywords": [
       "HCV1a", 
       "Ledipasvir", 
       "antiviral resistance", 
       "SNP", 
       "amino acid substitutions"
   ]