BCO Resources

BCODB API

Explore the BioCompute database RESTful APIs, generated by Swagger.

Nextflow

Automatically generate BCO from Nextflow pipelines with provenance information

HIVE Platform

The High-throughput Integrated Virtual Environment (HIVE) for genome analysis has platform specific tools for generating BioCompute Objects from workflows.

BCO-TOOL

Command line tool for to create, validate, and export BioCompute Objects.

CRAN BioCompute Tool

Tools to create, validate, and export BioCompute Objects in R. Users can encode information in data frames, and compose BioCompute Objects from the domains defined by the standard.

BCO Nexus

BCOnexus developed by DNAnexus, now known as Velsera, as a platform-free Docker tool for quick BCO evaluation.

Galaxy Platform

The Galaxy BCO API Extension enables Galaxy users to the export of Galaxy “workflow invocations” (i.e. realizations of a computational pipeline) in BCO format.

Cancer Genomics Cloud Seven Bridges

Tools to create, validate, and export BioCompute Objects in R.

Workshop

We hosted an in-person workshop on May 10, 2024. Learn more here. For all previous workshop materials, click here.