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	<title>Parametric Domain - Revision history</title>
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	<updated>2026-04-15T04:49:41Z</updated>
	<subtitle>Revision history for this page on the wiki</subtitle>
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	<entry>
		<id>https://wiki.biocomputeobject.org/index.php?title=Parametric_Domain&amp;diff=1285&amp;oldid=prev</id>
		<title>Lorikrammer: Created page with &quot;'''Go back to BCO Domains.'''  == Parametric Domain (parametric_domain) ==  This optional domain represents the list of parameters customizing the computational flow which can affect the output of the calculations. These fields can be custom to each kind of analysis and are tied to a particular pipeline implementation. The provenance domain IEEE schema and definition can be found [https://opensource.ieee.org/2791-object/ieee-2791-schema/-/blob/master/parametric_domai...&quot;</title>
		<link rel="alternate" type="text/html" href="https://wiki.biocomputeobject.org/index.php?title=Parametric_Domain&amp;diff=1285&amp;oldid=prev"/>
		<updated>2026-04-14T21:22:09Z</updated>

		<summary type="html">&lt;p&gt;Created page with &amp;quot;&amp;#039;&amp;#039;&amp;#039;Go back to &lt;a href=&quot;/BCO_Domains&quot; title=&quot;BCO Domains&quot;&gt;BCO Domains&lt;/a&gt;.&amp;#039;&amp;#039;&amp;#039;  == Parametric Domain (parametric_domain) ==  This optional domain represents the list of parameters customizing the computational flow which can affect the output of the calculations. These fields can be custom to each kind of analysis and are tied to a particular pipeline implementation. The provenance domain IEEE schema and definition can be found [https://opensource.ieee.org/2791-object/ieee-2791-schema/-/blob/master/parametric_domai...&amp;quot;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;'''Go back to [[BCO Domains]].'''&lt;br /&gt;
&lt;br /&gt;
== Parametric Domain (parametric_domain) ==&lt;br /&gt;
&lt;br /&gt;
This optional domain represents the list of parameters customizing the computational flow which can affect the output of the calculations. These fields can be custom to each kind of analysis and are tied to a particular pipeline implementation. The provenance domain IEEE schema and definition can be found [https://opensource.ieee.org/2791-object/ieee-2791-schema/-/blob/master/parametric_domain.json?ref_type=heads here].&lt;br /&gt;
&lt;br /&gt;
Condensed example:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
    &amp;quot;parametric_domain&amp;quot;: [&lt;br /&gt;
    ]&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot;&lt;br /&gt;
|+Required Components of the Provenance Domain&lt;br /&gt;
!Field&lt;br /&gt;
!Required&lt;br /&gt;
|-&lt;br /&gt;
|parametric_domain&lt;br /&gt;
|OPTIONAL&lt;br /&gt;
|}&lt;br /&gt;
It is recommended that these fields be generated automatically, but that may not always be possible. Please refer to the documentation of individual scripts and specific BCO descriptions for details. While this domain is not required, it is recommended that it be populated and that the values be '''non-default''' parameters.&lt;br /&gt;
&lt;br /&gt;
== Parametric Domain Example ==&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
    &amp;quot;parametric_domain&amp;quot;: [&lt;br /&gt;
        {&amp;quot;param&amp;quot;: &amp;quot;seed&amp;quot;, &amp;quot;value&amp;quot;: &amp;quot;14&amp;quot;, &amp;quot;step&amp;quot;: &amp;quot;1&amp;quot;},&lt;br /&gt;
        {&amp;quot;param&amp;quot;:&amp;quot;minimum_match_len&amp;quot;, &amp;quot;value&amp;quot;: &amp;quot;66&amp;quot;, &amp;quot;step&amp;quot;: &amp;quot;1&amp;quot;},&lt;br /&gt;
        {&amp;quot;param&amp;quot;: &amp;quot;divergence_threshold_percent&amp;quot;, &amp;quot;value&amp;quot;: 0.30, &amp;quot;step&amp;quot;: &amp;quot;1&amp;quot;},&lt;br /&gt;
        {&amp;quot;param&amp;quot;: &amp;quot;minimum_coverage&amp;quot;, &amp;quot;value&amp;quot;: &amp;quot;15&amp;quot;, &amp;quot;step&amp;quot;: &amp;quot;2&amp;quot;},&lt;br /&gt;
        {&amp;quot;param&amp;quot;: &amp;quot;freq_cutoff&amp;quot;, &amp;quot;value&amp;quot;: 0.10, &amp;quot;step&amp;quot;: &amp;quot;2&amp;quot;}&lt;br /&gt;
    ]&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;/div&gt;</summary>
		<author><name>Lorikrammer</name></author>
	</entry>
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