BCO Domains - Revision history

Lorikrammer: /* Top Level Fields */

2026-04-14T21:27:33Z

Top Level Fields

← Older revision		Revision as of 21:27, 14 April 2026
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	An Observable documentation showing a visualization of a BCO object workflow can be found [https://observablehq.com/@neurogenomics/biocompute-objects-visualization-student-workflows here].		An Observable documentation showing a visualization of a BCO object workflow can be found [https://observablehq.com/@neurogenomics/biocompute-objects-visualization-student-workflows here].

	=== [[~~Top-level\|~~Top Level Fields]] ===		=== [[Top Level Fields]] ===

	The top-level JSON object of a BCO includes attributes to define the BCO itself.		The top-level JSON object of a BCO includes attributes to define the BCO itself.

Lorikrammer: /* Error Domain (error_domain) */

2026-04-14T21:24:16Z

Error Domain (error_domain)

← Older revision		Revision as of 21:24, 14 April 2026
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	The io_domain represents the list of global input and output files created by the computational workflow.		The io_domain represents the list of global input and output files created by the computational workflow.

	=== [[Error~~-domain~~\|Error Domain (''error_domain'')]] ===		=== [[Error Domain\|Error Domain (''error_domain'')]] ===

	The error_domain defines the empirical and algorithmic limits and error sources of the BCO.		The error_domain defines the empirical and algorithmic limits and error sources of the BCO.

Lorikrammer: /* Parametric Domain (parametric_domain) */

2026-04-14T21:22:29Z

Parametric Domain (parametric_domain)

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	The execution_domain contains fields for the execution of the BCO.		The execution_domain contains fields for the execution of the BCO.

	=== [[Parametric~~-domain~~\|Parametric Domain (''parametric_domain'')]] ===		=== [[Parametric Domain\|Parametric Domain (''parametric_domain'')]] ===

	The parametric_domain represents the list of parameters customizing the computational flow which can affect the output of the calculations.		The parametric_domain represents the list of parameters customizing the computational flow which can affect the output of the calculations.

Lorikrammer: /* Execution Domain (execution_domain) */

2026-04-14T21:21:21Z

Execution Domain (execution_domain)

← Older revision		Revision as of 21:21, 14 April 2026
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	The description_domain contains a structured field for the description of external references, the pipeline steps, and the relationship of I/O objects.		The description_domain contains a structured field for the description of external references, the pipeline steps, and the relationship of I/O objects.

	=== [[Execution~~-domain~~\|Execution Domain (''execution_domain'')]] ===		=== [[Execution Domain\|Execution Domain (''execution_domain'')]] ===

	The execution_domain contains fields for the execution of the BCO.		The execution_domain contains fields for the execution of the BCO.

Lorikrammer: /* Description Domain (description_domain) */

2026-04-14T21:18:11Z

Description Domain (description_domain)

← Older revision		Revision as of 21:18, 14 April 2026
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	The extension_domain is a space for a user to add additional structured information that is not defined in the BioCompute schema. While the extension_domain is not defined by IEEE-2791-2020, each extension in the extension domain must provide a reference to the schema that defines it in order to validate. The extension domain is the place to add any additional structured information. We provide an example here that is neither exclusive nor exhaustive.		The extension_domain is a space for a user to add additional structured information that is not defined in the BioCompute schema. While the extension_domain is not defined by IEEE-2791-2020, each extension in the extension domain must provide a reference to the schema that defines it in order to validate. The extension domain is the place to add any additional structured information. We provide an example here that is neither exclusive nor exhaustive.

	=== [[Description~~-domain~~\|Description Domain (''description_domain'')]] ===		=== [[Description Domain\|Description Domain (''description_domain'')]] ===

	The description_domain contains a structured field for the description of external references, the pipeline steps, and the relationship of I/O objects.		The description_domain contains a structured field for the description of external references, the pipeline steps, and the relationship of I/O objects.

Lorikrammer: /* Extension Domain (extension_domain) */

2026-04-14T21:17:08Z

Extension Domain (extension_domain)

← Older revision		Revision as of 21:17, 14 April 2026
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	The usability_domain is meant to improve searchability by allowing a free-text description of the BCO.		The usability_domain is meant to improve searchability by allowing a free-text description of the BCO.

	=== [[Extension~~-domain~~\|Extension Domain (''extension_domain'')]] ===		=== [[Extension Domain\|Extension Domain (''extension_domain'')]] ===

	The extension_domain is a space for a user to add additional structured information that is not defined in the BioCompute schema. While the extension_domain is not defined by IEEE-2791-2020, each extension in the extension domain must provide a reference to the schema that defines it in order to validate. The extension domain is the place to add any additional structured information. We provide an example here that is neither exclusive nor exhaustive.		The extension_domain is a space for a user to add additional structured information that is not defined in the BioCompute schema. While the extension_domain is not defined by IEEE-2791-2020, each extension in the extension domain must provide a reference to the schema that defines it in order to validate. The extension domain is the place to add any additional structured information. We provide an example here that is neither exclusive nor exhaustive.

Lorikrammer: /* Usability Domain (usability_domain) */

2026-04-14T21:15:47Z

Usability Domain (usability_domain)

← Older revision		Revision as of 21:15, 14 April 2026
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	The provenance_domain defines the history, version and status of this BCO as part of the review process.		The provenance_domain defines the history, version and status of this BCO as part of the review process.

	=== [[Usability~~-domain~~\|Usability Domain (''usability_domain'')]] ===		=== [[Usability Domain\|Usability Domain (''usability_domain'')]] ===

	The usability_domain is meant to improve searchability by allowing a free-text description of the BCO.		The usability_domain is meant to improve searchability by allowing a free-text description of the BCO.

Lorikrammer: /* Provenance Domain (''provenance_domain'') */

2026-04-14T21:02:16Z

Provenance Domain (''provenance_domain'')

← Older revision		Revision as of 21:02, 14 April 2026
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	}		}

	=== [[Provenance Domain (''provenance_domain'')]] ===		=== [[Provenance Domain\|Provenance Domain (<nowiki>''provenance_domain''</nowiki>)]] ===

	The provenance_domain defines the history, version and status of this BCO as part of the review process.		The provenance_domain defines the history, version and status of this BCO as part of the review process.

Lorikrammer: /* Provenance Domain (provenance_domain) */

2026-04-14T21:01:58Z

Provenance Domain (provenance_domain)

← Older revision		Revision as of 21:01, 14 April 2026
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	}		}

	=== [[~~Provenance-domain\|~~Provenance Domain (''provenance_domain'')]] ===		=== [[Provenance Domain (''provenance_domain'')]] ===

	The provenance_domain defines the history, version and status of this BCO as part of the review process.		The provenance_domain defines the history, version and status of this BCO as part of the review process.

Lorikrammer: /* Error Domain, acceptable range of variability (error_domain) */

2026-04-14T20:52:22Z

Error Domain, acceptable range of variability (error_domain)

← Older revision		Revision as of 20:52, 14 April 2026
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	The io_domain represents the list of global input and output files created by the computational workflow.		The io_domain represents the list of global input and output files created by the computational workflow.

	=== [[Error-domain\|Error Domain~~, acceptable range of variability~~ (''error_domain'')]] ===		=== [[Error-domain\|Error Domain (''error_domain'')]] ===

	The error_domain defines the empirical and algorithmic limits and error sources of the BCO.		The error_domain defines the empirical and algorithmic limits and error sources of the BCO.